![]() This allows you to perform a single action that will be applied to all images. If you have multiple images or windows open that all require the same processing you can easily link the windows. This can be a useful tool for cropping part of an image. Note: When duplicating an image that has an ROI selected only the selected part of the image will be duplicated. You can give the duplicated image a new name or use the default ( original image name –x), then select OK.Ī duplicate image will then be displayed alongside the original. To create a duplicate image to Image -> Duplicate (or use shortcut Ctrl+Shift+D).Īlternatively, you can right click on the image and select Duplicate from the menu. ![]() Therefore it can be useful to work with a copy of your image so that the original remains unchanged. An overview window will be displayed in the top left corner of your image, showing your location within the original image.įIJI will often apply changes to the image as you work and some of these changes are irreversible. With this tool selected, click and drag with the left mouse button to move to different areas in the zoomed image. To switch to pan mode, select the hand tool from the tool bar on the FIJI interface. To move the image you can use the Scrolling Tool, also known as the Pan or Hand Tool. When you are zoomed in on an image you will not be able to see the entire image in the window. Other zoom options are available under Image -> Zoom. The position of the cursor on the image will determine the zoom centre. Left click to zoom in on the image, right click to zoom out. Once the zoom tool is active you can easily zoom in and out using the mouse buttons. Select the magnifying glass from the tool bar on the FIJI interface to activate the Zoom Tool. tiff file will usually have more information than a. The more detailed the metadata, the more information you will get. This will display information about the image based off the attached metadata. You can find more detailed image information by going to Image -> Show Info (or use shortcut Ctrl + I). ![]() ![]() This display tells you the image name, dimensions (in pixels if scale has not been calibrated or microns if calibrated), image type and file size. Some basic image information can be found in the top left corner of your opened image. Go to File -> Open Next (or use shortcut Ctrl+Shift+O) and FIJI will automatically close the current file and replace it with the next file in the folder. If you already have a file open in FIJI you can move on the next file in the series using the “Open Next” function. You can also open files by dragging and dropping the file from your folder into the FIJI interface. Navigate to your folder and select the file you want to open. To open files in FIJI go to File -> Open (or use shortcut Ctrl+O). ![]() An information bar below the tool bar will display details of the tools or image when you hover over them with the cursor. The FIJI interface opens as a small rectangular window on your screen, containing 8 menu options and a series of buttons, which will be referred to here as the tool bar. The image Interstitium 2.tiff will be used for demonstration throughout this section. In this section we will go through the basics for navigating the FIJI interface and opening and working with your images in the FIJI software. The FIJI interface has many menus and options. ![]()
0 Comments
Leave a Reply. |
AuthorWrite something about yourself. No need to be fancy, just an overview. ArchivesCategories |